parallelly 1.31.1 is on CRAN. The parallelly package enhances the parallel package - our built-in R package for parallel processing - by improving on existing features and by adding new ones. Somewhat simplified, parallelly provides the things that you would otherwise expect to find in the parallel package. The future package relies on the parallelly package internally for local and remote parallelization. Since my previous post on parallelly in November 2021, I’ve fixed a few bugs and added some new features to the package;

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future 1.24.0 is on CRAN. It comes with one significant update related to random number generation, further deprecation of legacy future strategies, a slight improvement to plan() and tweaks(), and some bug fixes. Below are the most important changes. One of many possible random number generators. This one was carefully designed by XKCD [CC BY-NC 2.5]. future(…, seed = TRUE) updates RNG state In future (< 1.

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Happy New Year! I made some updates to the future framework during 2021 that involve overall improvements and essential preparations to go forward with some exciting new features that I’m keen to work on during 2022. The future framework makes it easy to parallelize existing R code - often with only a minor change of code. The goal is to lower the barriers so that anyone can quickly and safely speed up their existing R code in a worry-free manner.

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parallelly 1.29.0 is on CRAN. The parallelly package enhances the parallel package - our built-in R package for parallel processing - by improving on existing features and by adding new ones. Somewhat simplified, parallelly provides the things that you would otherwise expect to find in the parallel package. The future package rely on the parallelly package internally for local and remote parallelization. Since my previous post on parallelly five months ago, the parallelly package had some bugs fixed, and it gained a few new features;

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parallelly 1.26.0 is on CRAN. It comes with one major improvement and one new function: The setup of parallel workers is now much faster, which comes from using a concurrent, instead of sequential, setup strategy The new freePort() can be used to find a TCP port that is currently available Faster setup of local, parallel workers In R 4.0.0, which was released in May 2020, parallel::makeCluster(n) gained the power of setting up the n local cluster nodes all at the same time, which greatly reduces to total setup time.

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A piece of an ice core - more pleasing to look at than yet another illustration of a CPU core (Image credit: Ludovic Brucker, NASA’s Goddard Space Flight Center) parallelly 1.25.0 is on CRAN. It comes with two major improvements: You can now use availableCores(omit = n) to ask for all but n CPU cores makeClusterPSOCK() can finally use the built-in SSH client on MS Windows 10 to set up remote workers

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This is a guest post by Chris Paciorek, Department of Statistics, University of California at Berkeley. In this post, I’ll demonstrate that you can easily use the future package in R on a cluster of machines running in the cloud, specifically on a Kubernetes cluster. This allows you to easily doing parallel computing in R in the cloud. One advantage of doing this in the cloud is the ability to easily scale the number and type of (virtual) machines across which you run your parallel computation.

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This is an announcement that future.BatchJobs - A Future API for Parallel and Distributed Processing using BatchJobs has been archived on CRAN. The package has been deprecated for years with a recommendation of using future.batchtools instead. The latter has been on CRAN since June 2017 and builds upon the batchtools package, which itself supersedes the BatchJobs package. To wrap up the three-and-a-half year long life of future.

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future 1.20.1 is on CRAN. It adds some new features, deprecates old and unwanted behaviors, adds a couple of vignettes, and fixes a few bugs. Interactive debugging First out among the new features, and a long-running feature request, is the addition of argument split to plan(), which allows us to split, or “tee”, any output produced by futures. The default is split = FALSE for which standard output and conditions are captured by the future and only relayed after the future has been resolved, i.

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parallelly adverb par·​al·​lel·​ly | \ ˈpa-rə-le(l)li \ Definition: in a parallel manner future noun fu·​ture | \ ˈfyü-chər \ Definition: existing or occurring at a later time I’ve cleaned up around the house - with the recent release of future 1.20.1, the package gained a dependency on the new parallelly package. Now, if you’re like me and concerned about bloating package dependencies, I’m sure you immediately wondered why I chose to introduce a new dependency.

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Trust the Future

Each time we use R to analyze data, we rely on the assumption that functions used produce correct results. If we can’t make this assumption, we have to spend a lot of time validating every nitty detail. Luckily, we don’t have to do this. There are many reasons for why we can comfortably use R for our analyses and some of them are unique to R. Here are some I could think of while writing this blog post - I’m sure I forgot something:

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Parallel ‘Digital Rain’ by Jahobr After two-and-a-half months, future 1.19.1 is now on CRAN. As usual, there are some bug fixes and minor improvements here and there (NEWS), including things needed by the next version of furrr. For those of you who use Slurm or LSF/OpenLava as a scheduler on your high-performance compute (HPC) cluster, future::availableCores() will now do a better job respecting the CPU resources that those schedulers allocate for your R jobs.

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Design: Dan LaBar I presented Future: Simple Async, Parallel & Distributed Processing in R Why and What’s New? at rstudio::conf 2020 in San Francisco, USA, on January 29, 2020. Below are the slides for my talk (17 slides; ~18+2 minutes): HTML (incremental Google Slides; requires online access) PDF (flat slides) Video with closed captions (official rstudio::conf recording) First of all, a big thank you goes out to Dan LaBar (@embiggenData) for proposing and contributing the original design of the future hex sticker.

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Below are the slides for my Future: Simple Parallel and Distributed Processing in R that I presented at the useR! 2019 conference in Toulouse, France on July 9-12, 2019. My talk (25 slides; ~15+3 minutes): Title: Future: Simple Parallel and Distributed Processing in R HTML (incremental Google Slides; requires online access) PDF (flat slides) Video (official recording) I want to send out a big thank you to everyone making the useR!

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A bit late but here are my slides on Future: Friendly Parallel Processing in R for Everyone that I presented at the satRday LA 2019 conference in Los Angeles, CA, USA on April 6, 2019. My talk (33 slides; ~45 minutes): Title: : Friendly Parallel and Distributed Processing in R for Everyone HTML (incremental slides; requires online access) PDF (flat slides) Video (44 min; YouTube; sorry, different page numbers) Thank you all for making this a stellar satRday event.

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Below are links to my slides from my talk on Future: Friendly Parallel Processing in R for Everyone that I presented last month at the satRday Paris 2019 conference in Paris, France (February 23, 2019). My talk (32 slides; ~40 minutes): Title: Future: Friendly Parallel Processing in R for Everyone HTML (incremental slides; requires online access) PDF (flat slides) A big shout out to the organizers, all the volunteers, and everyone else for making it a great satRday.

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A commonly asked question in the R community is: How can I parallelize the following for-loop? The answer almost always involves rewriting the for (...) { ... } loop into something that looks like a y <- lapply(...) call. If you can achieve that, you can parallelize it via for instance y <- future.apply::future_lapply(...) or y <- foreach::foreach() %dopar% { ... }. For some for-loops it is straightforward to rewrite the code to make use of lapply() instead, whereas in other cases it can be a bit more complicated, especially if the for-loop updates multiple variables in each iteration.

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New versions of the following future backends are available on CRAN: future.callr - parallelization via callr, i.e. on the local machine future.batchtools - parallelization via batchtools, i.e. on a compute cluster with job schedulers (SLURM, SGE, Torque/PBS, etc.) but also on the local machine future.BatchJobs - (maintained for legacy reasons) parallelization via BatchJobs, which is the predecessor of batchtools These releases fix a few small bugs and inconsistencies that were identified with help of the future.

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future 1.9.0 - Unified Parallel and Distributed Processing in R for Everyone - is on CRAN. This is a milestone release: Standard output is now relayed from futures back to the master R session - regardless of where the futures are processed! Disclaimer: A future’s output is relayed only after it is resolved and when its value is retrieved by the master R process. In other words, the output is not streamed back in a “live” fashion as it is produced.

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Got compute? future.apply 1.0.0 - Apply Function to Elements in Parallel using Futures - is on CRAN. With this milestone release, all* base R apply functions now have corresponding futurized implementations. This makes it easier than ever before to parallelize your existing apply(), lapply(), mapply(), … code - just prepend future_ to an apply call that takes a long time to complete. That’s it! The default is sequential processing but by using plan(multiprocess) it’ll run in parallel.

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Author's picture

Henrik Bengtsson

MSc CS | PhD Math Stat | Associate Professor | R Foundation | R Consortium

Associate Professor